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Cloning, purification and structure determination of the HIV integrase-binding domain of lens epithelium-derived growth factor

MetadataDetails
Publication Date2018-02-26
JournalActa Crystallographica Section F Structural Biology Communications
AuthorsClare Hannon, Abimael Cruz-Migoni, Olga Platonova, Robin L. Owen, Joanne E. Nettleship
InstitutionsDiamond Light Source, John Radcliffe Hospital
Citations5

Lens epithelium-derived growth factor (LEDGF)/p75 is the dominant binding partner of HIV-1 integrase in human cells. The crystal structure of the HIV integrase-binding domain (IBD) of LEDGF has been determined in the absence of ligand. IBD was overexpressed in Escherichia coli , purified and crystallized by sitting-drop vapour diffusion. X-ray diffraction data were collected at Diamond Light Source to a resolution of 2.05 ƅ. The crystals belonged to space group P 2 1 , with eight polypeptide chains in the asymmetric unit arranged as an unusual octamer composed of four domain-swapped IBD dimers. IBD exists as a mixture of monomers and dimers in concentrated solutions, but the dimers are unlikely to be biologically relevant.